Package: BiocGenerics
Title: S4 generic functions used in Bioconductor
Description: The package defines many S4 generic functions used in Bioconductor.
biocViews: Infrastructure
URL: https://bioconductor.org/packages/BiocGenerics
BugReports: https://github.com/Bioconductor/BiocGenerics/issues
Version: 0.58.1
License: Artistic-2.0
Encoding: UTF-8
Authors@R: c(
	person("The Bioconductor Dev Team", role="aut"),
	person("Hervé", "Pagès", role=c("aut", "cre"),
		email="hpages.on.github@gmail.com",
		comment=c(ORCID="0009-0002-8272-4522")),
	person("Laurent", "Gatto", role="ctb",
		email="laurent.gatto@uclouvain.be",
		comment=c(ORCID="0000-0002-1520-2268")),
	person("Nathaniel", "Hayden", role="ctb"),
	person("James", "Hester", role="ctb"),
	person("Wolfgang", "Huber", role="ctb"),
	person("Michael", "Lawrence", role="ctb"),
	person("Martin", "Morgan", role="ctb",
		email="mtmorgan.xyz@gmail.com",
		comment=c(ORCID="0000-0002-5874-8148")),
	person("Valerie", "Obenchain", role="ctb"))
Depends: R (>= 4.0.0), methods, utils, graphics, stats, generics
Imports: methods, utils, graphics, stats
Suggests: Biobase, S4Vectors, IRanges, S4Arrays, SparseArray,
        DelayedArray, HDF5Array, GenomicRanges, pwalign, Rsamtools,
        AnnotationDbi, affy, affyPLM, DESeq2, flowClust, MSnbase,
        annotate, MultiAssayExperiment, RUnit
Collate: S3-classes-as-S4-classes.R utils.R normarg-utils.R
        replaceSlots.R aperm.R append.R as.data.frame.R as.list.R
        as.vector.R cbind.R do.call.R duplicated.R eval.R Extremes.R
        format.R funprog.R get.R grep.R is.unsorted.R lapply.R mapply.R
        match.R mean.R nrow.R order.R paste.R rank.R rep.R
        row_colnames.R saveRDS.R sort.R start.R subset.R t.R table.R
        tapply.R unique.R unlist.R unsplit.R which.R which.min.R
        relist.R boxplot.R image.R density.R IQR.R mad.R residuals.R
        var.R weights.R xtabs.R setops.R annotation.R combine.R
        containsOutOfMemoryData.R dbconn.R dge.R dims.R fileName.R
        longForm.R normalize.R Ontology.R organism_species.R paste2.R
        path.R plotMA.R plotPCA.R score.R strand.R toTable.R type.R
        updateObject.R testPackage.R zzz.R
git_url: https://git.bioconductor.org/packages/BiocGenerics
git_branch: RELEASE_3_23
git_last_commit: 995c7b3
git_last_commit_date: 2026-05-14
Repository: Bioconductor 3.23
Date/Publication: 2026-05-14
NeedsCompilation: no
Packaged: 2026-05-14 20:33:53 UTC; biocbuild
Author: The Bioconductor Dev Team [aut],
  Hervé Pagès [aut, cre] (ORCID: <https://orcid.org/0009-0002-8272-4522>),
  Laurent Gatto [ctb] (ORCID: <https://orcid.org/0000-0002-1520-2268>),
  Nathaniel Hayden [ctb],
  James Hester [ctb],
  Wolfgang Huber [ctb],
  Michael Lawrence [ctb],
  Martin Morgan [ctb] (ORCID: <https://orcid.org/0000-0002-5874-8148>),
  Valerie Obenchain [ctb]
Maintainer: Hervé Pagès <hpages.on.github@gmail.com>
